STRINGSTRING
ENSCING00000016239 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000016239" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000016239Uncharacterized protein (107 aa)    
Predicted Functional Partners:
ENSCING00000005541
Uncharacterized protein (492 aa)
   
  0.744
ENSCING00000002644
Uncharacterized protein (470 aa)
   
  0.744
ENSCING00000002066
Uncharacterized protein (502 aa)
   
  0.744
ENSCING00000002057
Uncharacterized protein (501 aa)
   
  0.744
vgat
Vesicular GABA transporter (637 aa)
     
  0.731
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.584
gmps
Uncharacterized protein (688 aa)
   
   
  0.549
ENSCING00000023252
Uncharacterized protein (281 aa)
   
        0.546
ENSCING00000022142
Uncharacterized protein (504 aa)
   
        0.546
ENSCING00000007379
Uncharacterized protein (1514 aa)
     
        0.534
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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