STRINGSTRING
ENSCING00000016548 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000016548" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000016548Uncharacterized protein (359 aa)    
Predicted Functional Partners:
acl
ATP citrate-lyase (404 aa)
   
  0.984
ENSCING00000018403
Citrate synthase (469 aa)
   
  0.873
ENSCING00000002850
Uncharacterized protein (2241 aa)
   
 
  0.865
dpyd
Uncharacterized protein (1024 aa)
   
   
  0.862
pkm
Pyruvate kinase (534 aa)
   
  0.799
ENSCING00000008077
Uncharacterized protein (470 aa)
   
  0.794
ENSCING00000008658
Isocitrate dehydrogenase [NADP] (422 aa)
   
 
  0.791
ENSCING00000018343
Isocitrate dehydrogenase [NADP] (414 aa)
   
 
  0.791
pgm1
Uncharacterized protein (560 aa)
     
 
  0.761
ENSCING00000008364
Aspartate aminotransferase (415 aa)
     
  0.744
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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