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gh18 protein (Ciona intestinalis) - STRING interaction network
"gh18" - Chitinase precursor in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gh18Chitinase precursor (648 aa)    
Predicted Functional Partners:
hexb
Uncharacterized protein (538 aa)
   
 
  0.968
ENSCING00000022492
Uncharacterized protein (372 aa)
   
 
  0.954
ENSCING00000009973
Uncharacterized protein (341 aa)
   
 
  0.906
ENSCING00000008025
Uncharacterized protein (399 aa)
         
    0.900
ENSCING00000013889
Uncharacterized protein (403 aa)
   
 
  0.742
ENSCING00000005422
Uncharacterized protein (344 aa)
   
 
  0.732
ENSCING00000004308
Uncharacterized protein (535 aa)
   
 
  0.698
ENSCING00000002374
Uncharacterized protein (395 aa)
           
  0.515
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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