STRINGSTRING
ENSCING00000016946 protein (Ciona intestinalis) - STRING interaction network
"ENSCING00000016946" - Uncharacterized protein in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCING00000016946Uncharacterized protein (382 aa)    
Predicted Functional Partners:
ENSCING00000021783
Uncharacterized protein (96 aa)
     
      0.867
ENSCING00000001375
Uncharacterized protein (416 aa)
     
      0.867
ENSCING00000003340
Uncharacterized protein (217 aa)
       
  0.578
rcl1
Rac and Cdc42-like 1 protein (194 aa)
       
    0.498
LOC445702
Rac1 protein (192 aa)
       
    0.498
ENSCING00000007978
Uncharacterized protein (276 aa)
           
  0.461
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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