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ciarr protein (Ciona intestinalis) - STRING interaction network
"ciarr" - Arrestin in Ciona intestinalis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ciarrArrestin (253 aa)    
Predicted Functional Partners:
adrbk2
Uncharacterized protein (591 aa)
       
  0.935
ENSCING00000013284
Uncharacterized protein (332 aa)
       
  0.916
ENSCING00000003418
Uncharacterized protein (466 aa)
       
  0.906
ENSCING00000001374
Uncharacterized protein (104 aa)
       
  0.906
ap1b1
Uncharacterized protein (772 aa)
       
    0.862
ENSCING00000001739
Uncharacterized protein ; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles (1635 aa)
       
  0.844
ENSCING00000019401
Uncharacterized protein (146 aa)
       
    0.786
erk1/2
Mitogen-activated protein kinase (350 aa)
       
  0.778
gnrhr3
Gonadotropin-releasing hormone receptor (454 aa)
     
  0.742
gnrhr2
Gonadotropin-releasing hormone receptor (401 aa)
     
  0.742
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: C. intestinalis, Ciona intestinalis
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