STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100180005Complement component C6-like isoform X1. (565 aa)    
Predicted Functional Partners:
F6R7P6_CIOIN
MACPF domain-containing protein.
  
 
 
0.655
F6VY95_CIOIN
Uncharacterized protein.
  
 
 
0.621
LOC100184927
MACPF domain-containing protein.
  
 
 
0.609
F6T0A0_CIOIN
MACPF domain-containing protein.
  
 
 
0.608
H2XP60_CIOIN
MACPF domain-containing protein.
  
  
 
0.584
LOC100184654
Voltage-dependent anion-selective channel protein 2.
   
 
  0.540
LOC113474037
Complement component C6-like isoform X2.
  
 
 
0.520
H2XLU5_CIOIN
MACPF domain-containing protein.
   
 
 
0.462
F6X678_CIOIN
Uncharacterized protein.
  
  
 
0.420
Your Current Organism:
Ciona intestinalis
NCBI taxonomy Id: 7719
Other names: Ascidia intestinalis, C. intestinalis, sea vase, vase tunicate, yellow sea squirt
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.