STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XSF8_BRAFLMRG domain-containing protein. (450 aa)    
Predicted Functional Partners:
C3Z887_BRAFL
CXC domain-containing protein.
    
 0.994
C3ZXG4_BRAFL
Uncharacterized protein.
   
 0.957
C3ZGX7_BRAFL
Enhancer of polycomb-like protein.
   
 0.937
C3ZL59_BRAFL
Uncharacterized protein.
    
 
 0.900
C3YLY7_BRAFL
Uncharacterized protein.
    
 0.891
C3XUP9_BRAFL
Uncharacterized protein.
   
 0.867
C3XQG2_BRAFL
Histone acetyltransferase; Belongs to the MYST (SAS/MOZ) family.
    
 0.860
C3ZLP4_BRAFL
Uncharacterized protein; Belongs to the actin family.
   
 0.842
C3Z0M6_BRAFL
HDAC_interact domain-containing protein.
    
 0.836
C3Y6A4_BRAFL
RuvB-like helicase; Belongs to the RuvB family.
   
 0.815
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.