STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3XU21_BRAFLUncharacterized protein. (248 aa)    
Predicted Functional Partners:
C3YYY0_BRAFL
GRASP55_65 domain-containing protein.
   
 0.988
C3XU13_BRAFL
Uncharacterized protein.
    
 0.859
C3YEP6_BRAFL
Uncharacterized protein.
    
 0.679
C3ZQN0_BRAFL
J domain-containing protein.
    
 0.679
C3Z907_BRAFL
Protein kinase domain-containing protein.
      
 0.575
C3XR61_BRAFL
Uncharacterized protein.
   
  
 0.537
C3Y650_BRAFL
Tetraspanin.
      
 0.515
C3YHI6_BRAFL
Uncharacterized protein.
      
 0.420
C3ZB41_BRAFL
RRM domain-containing protein.
      
 0.416
C3Z8S1_BRAFL
Mitogen-activated protein kinase; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. MAP kinase subfamily.
   
 
  0.415
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.