STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y143_BRAFLVezatin domain-containing protein. (808 aa)    
Predicted Functional Partners:
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
   0.855
C3YP05_BRAFL
Methionine aminopeptidase; Cotranslationally removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met- Ala-, Cys, Gly, Pro, Ser, Thr, or Val).
    
 0.817
C3Z4W3_BRAFL
Uncharacterized protein.
  
 
 0.738
C3ZTF1_BRAFL
Uncharacterized protein.
  
 
 0.734
C3XWH9_BRAFL
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
  
 
 0.726
C3ZH65_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.716
C3YD43_BRAFL
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 
 0.699
C3Y615_BRAFL
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
  
 
 0.689
C3Y261_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.685
C3Z8T3_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
   0.669
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.