STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y2V9_BRAFLF-BAR domain-containing protein; Belongs to the UDP-glycosyltransferase family. (875 aa)    
Predicted Functional Partners:
C3ZXU0_BRAFL
Uncharacterized protein.
   
 0.948
C3ZHX3_BRAFL
tRNA-splicing endonuclease subunit Sen2; Constitutes one of the two catalytic subunit of the tRNA- splicing endonuclease complex, a complex responsible for identification and cleavage of the splice sites in pre-tRNA. It cleaves pre-tRNA at the 5'- and 3'-splice sites to release the intron. The products are an intron and two tRNA half-molecules bearing 2',3'-cyclic phosphate and 5'-OH termini. There are no conserved sequences at the splice sites, but the intron is invariably located at the same site in the gene, placing the splice sites an invariant distance from the constant structural [...]
    
   0.862
C3ZIB9_BRAFL
Uncharacterized protein.
    
 0.792
C3ZLK0_BRAFL
Uncharacterized protein.
   
 0.738
C3ZLK1_BRAFL
Uncharacterized protein.
   
 0.737
C3YC73_BRAFL
Uncharacterized protein.
    
 0.693
C3ZTX9_BRAFL
Uncharacterized protein.
    
 0.580
C4A0E8_BRAFL
Uncharacterized protein.
    
 0.580
C3YIJ5_BRAFL
MHD domain-containing protein.
    
 0.576
C3YIJ6_BRAFL
FCH domain-containing protein.
    
 0.576
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (26%) [HD]