STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y5D8_BRAFLUncharacterized protein. (1346 aa)    
Predicted Functional Partners:
C3Y6F0_BRAFL
Uncharacterized protein.
   
 0.965
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
  0.942
C3YE46_BRAFL
Importin N-terminal domain-containing protein.
   
 
 0.916
C3YE60_BRAFL
Importin N-terminal domain-containing protein.
   
 
 0.916
C3Y3B5_BRAFL
RanBD1 domain-containing protein.
   
 0.872
C3ZEZ0_BRAFL
RanBD1 domain-containing protein.
   
 0.872
C3ZEZ4_BRAFL
Uncharacterized protein.
   
 0.872
C3ZQV8_BRAFL
RanBD1 domain-containing protein.
   
 0.872
C3YM21_BRAFL
Uncharacterized protein.
   
 0.827
C3XVK6_BRAFL
GTP-binding nuclear protein Ran; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 0.811
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (26%) [HD]