STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YBF5_BRAFLUncharacterized protein. (112 aa)    
Predicted Functional Partners:
C3XQ39_BRAFL
Uncharacterized protein.
   
 
 0.999
C3XQF5_BRAFL
WD_REPEATS_REGION domain-containing protein.
   
 
 0.999
C3XVP6_BRAFL
Ribosomal_L6e_N domain-containing protein.
   
 
 0.999
C3XWH9_BRAFL
KH type-2 domain-containing protein; Belongs to the universal ribosomal protein uS3 family.
   
 0.999
C3XWI0_BRAFL
Uncharacterized protein.
   
 
 0.999
C3XXJ3_BRAFL
Uncharacterized protein.
   
 
 0.999
C3Y0H7_BRAFL
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.999
C3Y0K8_BRAFL
Uncharacterized protein.
   
 
 0.999
C3Y261_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uS13 family.
   
 0.999
C3Y2R6_BRAFL
PIP49_N domain-containing protein; Belongs to the universal ribosomal protein uS7 family.
   
 0.999
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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