STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YJC5_BRAFLThymidine kinase. (196 aa)    
Predicted Functional Partners:
C3ZXJ5_BRAFL
Thymidylat_synt domain-containing protein.
  
 
 0.985
C3Z938_BRAFL
Thymidine phosphorylase; Catalyzes the reversible phosphorolysis of thymidine. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.
    
 0.966
C3XPZ1_BRAFL
CMP/dCMP-type deaminase domain-containing protein.
    
 0.953
C3ZEC2_BRAFL
Thymidylate_kin domain-containing protein.
  
 
 0.943
C3Y382_BRAFL
Thymidylate_kin domain-containing protein.
  
 
 0.934
C3YZ91_BRAFL
CMP/dCMP-type deaminase domain-containing protein.
  
 
 0.926
C3ZT23_BRAFL
CEP44 domain-containing protein.
  
 
 0.926
C3XTE4_BRAFL
Uncharacterized protein.
    
 0.898
C3Y0M9_BRAFL
CMP/dCMP-type deaminase domain-containing protein.
    
 0.898
C3YWF0_BRAFL
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
   
 
 0.897
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.