STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YRD8_BRAFLBTB domain-containing protein. (562 aa)    
Predicted Functional Partners:
C3ZRY1_BRAFL
Uncharacterized protein.
  
  
  0.566
C3ZM25_BRAFL
Uncharacterized protein.
  
 
  0.554
C3ZIV4_BRAFL
Uncharacterized protein.
  
  
  0.528
C3YKP1_BRAFL
BTB domain-containing protein.
  
  
  0.515
C4A0G7_BRAFL
Uncharacterized protein.
  
   
 0.515
C3YKP4_BRAFL
BTB domain-containing protein.
  
  
  0.506
C3ZRF6_BRAFL
Ubiquitin-like domain-containing protein.
    
 0.461
C3YKX7_BRAFL
BTB domain-containing protein.
  
  
 
0.442
C3YB87_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.439
C3ZDY2_BRAFL
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.439
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.