STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YRS4_BRAFLEngB-type G domain-containing protein. (174 aa)    
Predicted Functional Partners:
C3ZD23_BRAFL
TrmE-type G domain-containing protein.
    
 
 0.961
C3YER5_BRAFL
Uncharacterized protein.
   
 
 0.912
C3YC16_BRAFL
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.907
C3Z4C5_BRAFL
SpoU_sub_bind domain-containing protein.
  
 
 0.907
C3XTZ0_BRAFL
Uncharacterized protein.
  
   0.902
C3ZH65_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
  
   0.901
C3ZA12_BRAFL
KOW domain-containing protein.
  
   0.895
C3ZBU4_BRAFL
Uncharacterized protein.
  
   0.895
C3ZL87_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL13 family.
  
   0.888
C3Z7D1_BRAFL
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
   0.886
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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