STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3YVA4_BRAFLDUF4550 domain-containing protein. (1116 aa)    
Predicted Functional Partners:
C3YLP2_BRAFL
RuvB-like helicase; Belongs to the RuvB family.
    
 0.682
C3ZLP4_BRAFL
Uncharacterized protein; Belongs to the actin family.
   
 0.675
C3ZRF2_BRAFL
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 0.653
C3YTV5_BRAFL
Uncharacterized protein; Belongs to the actin family.
    
 0.650
C3ZYC5_BRAFL
YL1_C domain-containing protein.
    
 0.610
C3Y0Y4_BRAFL
NFRKB_winged domain-containing protein.
   
 0.604
C3Z1D0_BRAFL
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.588
C3ZBE2_BRAFL
DUF4201 domain-containing protein.
   
  
 0.567
C3YLR5_BRAFL
Uncharacterized protein.
   
 0.546
C3YVM0_BRAFL
SAP domain-containing protein.
   
 0.546
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.