STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z2T0_BRAFLUncharacterized protein. (112 aa)    
Predicted Functional Partners:
C3XZ88_BRAFL
Uncharacterized protein.
     
 0.607
C3YXK9_BRAFL
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
     
 0.556
C3YKG3_BRAFL
Nt_Gln_amidase domain-containing protein.
      
 0.529
C3ZS24_BRAFL
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
 0.519
C3Y721_BRAFL
Eukaryotic translation initiation factor 5A.
     
 0.476
C3Z6Z0_BRAFL
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
  
  
 0.475
C3Z5T8_BRAFL
Uncharacterized protein.
      
 0.443
C3YDE3_BRAFL
Flavodoxin-like domain-containing protein.
   
    0.420
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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