STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z5K8_BRAFLUncharacterized protein. (272 aa)    
Predicted Functional Partners:
C3YU01_BRAFL
Uncharacterized protein.
 
      0.899
C3YMT1_BRAFL
NIDO domain-containing protein.
 
      0.800
C3Y9U4_BRAFL
Uncharacterized protein.
 
  
   0.755
C3XRC2_BRAFL
Uncharacterized protein.
 
  
   0.677
C3XSU6_BRAFL
Uncharacterized protein.
 
  
   0.606
C3YTN5_BRAFL
Uncharacterized protein.
 
  
   0.601
C3YZG5_BRAFL
Uncharacterized protein.
 
  
   0.590
C3YVU5_BRAFL
Uncharacterized protein.
 
  
   0.571
C3ZBF9_BRAFL
Uncharacterized protein.
 
  
   0.562
C3ZN52_BRAFL
Uncharacterized protein.
 
  
   0.487
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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