STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Z7H6_BRAFLUncharacterized protein. (558 aa)    
Predicted Functional Partners:
C3Y1R0_BRAFL
Spatacsin_C domain-containing protein.
    
 
 0.729
C3ZTW4_BRAFL
Uncharacterized protein.
    
 0.728
C3YH19_BRAFL
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.621
C3Z4H3_BRAFL
Adaptin_N domain-containing protein.
     
 0.548
C3YGG4_BRAFL
AP complex subunit beta; Belongs to the adaptor complexes large subunit family.
     
 0.544
C3Y1T3_BRAFL
AB hydrolase-1 domain-containing protein.
      
 0.503
C3XZA3_BRAFL
DUF547 domain-containing protein.
      
 0.491
C3XZA5_BRAFL
FYVE-type domain-containing protein.
      
 0.491
C3XTT3_BRAFL
AP-1 complex subunit gamma.
     
 0.452
C3XZB1_BRAFL
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.445
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.