STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZB47_BRAFLUncharacterized protein. (444 aa)    
Predicted Functional Partners:
rab-GDI
Rab GDP dissociation inhibitor; Regulates the GDP/GTP exchange reaction of most RAB proteins by inhibiting the dissociation of GDP from them, and the subsequent binding of GTP; Belongs to the Rab GDI family.
   
 0.892
C3YMC2_BRAFL
RIC1 domain-containing protein.
    
 0.795
C3Y4K0_BRAFL
Uncharacterized protein.
    
 0.728
C3Y0K3_BRAFL
Vps53_N domain-containing protein.
    
 0.727
C3XZR0_BRAFL
Uncharacterized protein.
    
 0.703
C3YLJ7_BRAFL
Uncharacterized protein.
    
 0.664
C3YN80_BRAFL
Uncharacterized protein.
    
 0.664
C3Y1F8_BRAFL
Uncharacterized protein.
    
 0.641
C3ZHM7_BRAFL
Uncharacterized protein.
  
 
0.636
C3ZAU4_BRAFL
t-SNARE coiled-coil homology domain-containing protein.
    
 0.635
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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