STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZBV8_BRAFLMetallophos domain-containing protein. (376 aa)    
Predicted Functional Partners:
C3YYK3_BRAFL
TPR_REGION domain-containing protein.
      
 0.705
C3YSP2_BRAFL
Uncharacterized protein.
    
 
 0.627
C3ZNR2_BRAFL
E1_dh domain-containing protein.
 
      0.551
C3YZW4_BRAFL
Uncharacterized protein.
    
 
 0.545
C3YU68_BRAFL
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.530
C3YVZ3_BRAFL
Uncharacterized protein.
      
 0.506
C3XUL1_BRAFL
Uncharacterized protein.
      
 0.499
C3YC93_BRAFL
Uncharacterized protein.
      
 0.478
C3ZI05_BRAFL
Uncharacterized protein.
      
 0.463
C3YQ48_BRAFL
Mannosyltransferase.
    
 
 0.458
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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