STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZGF8_BRAFLUncharacterized protein. (618 aa)    
Predicted Functional Partners:
C3ZVY1_BRAFL
Protein kinase domain-containing protein.
    
 0.972
C3ZVY2_BRAFL
Uncharacterized protein.
    
 0.972
C3YMM0_BRAFL
Uncharacterized protein.
   
 0.690
C3YE16_BRAFL
Uncharacterized protein.
  
 0.669
C3XZT9_BRAFL
GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner; Belongs to the GrpE family.
  
 
 0.651
C3YZC2_BRAFL
ATPase_AAA_core domain-containing protein.
  
 
 0.651
C3XRA3_BRAFL
HATPase_c domain-containing protein.
   
 0.607
C3XS32_BRAFL
HATPase_c domain-containing protein.
   
 0.607
C3XX79_BRAFL
Uncharacterized protein.
   
 0.607
C3Y9C6_BRAFL
Flavin_Reduct domain-containing protein.
   
 0.607
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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