STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZGY5_BRAFLUncharacterized protein. (1080 aa)    
Predicted Functional Partners:
C3YJ69_BRAFL
2-Hacid_dh_C domain-containing protein.
   
 
 0.681
C3Y268_BRAFL
MADS-box domain-containing protein.
   
 
 0.526
C3ZWF0_BRAFL
Uncharacterized protein; Belongs to the intermediate filament family.
      
 0.526
C3YC05_BRAFL
BHLH domain-containing protein.
     
 0.514
C3Y1E5_BRAFL
Eyes absent homolog; Belongs to the HAD-like hydrolase superfamily. EYA family.
      
 0.507
C3YPI9_BRAFL
BHLH domain-containing protein.
      
 0.440
C3Z6H5_BRAFL
TEA domain-containing protein.
    
 
 0.430
C3YSM4_BRAFL
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
 
 0.401
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.