STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZQT2_BRAFLSGNH_hydro domain-containing protein. (246 aa)    
Predicted Functional Partners:
C3ZMK0_BRAFL
Uncharacterized protein.
    
 0.889
C3XRN8_BRAFL
Asparaginase domain-containing protein.
    
 0.856
C3XUM8_BRAFL
Glutamine amidotransferase type-2 domain-containing protein.
   
 
  0.846
C3Z840_BRAFL
Glutamine synthetase.
  
 
 0.589
C3Z841_BRAFL
Glutamine synthetase.
  
 
 0.589
C3YC80_BRAFL
NADPH:adrenodoxin oxidoreductase, mitochondrial.
    
  0.545
C3Z8X8_BRAFL
FA_desaturase domain-containing protein.
    
  0.545
C3YBZ9_BRAFL
Uncharacterized protein.
     
 0.544
C3YEA4_BRAFL
BPL/LPL catalytic domain-containing protein.
      
 0.501
C3XRL1_BRAFL
Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
      
 0.485
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.