STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZS24_BRAFLUncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (320 aa)    
Predicted Functional Partners:
C3YQ73_BRAFL
MoCF_biosynth domain-containing protein.
    
 
 0.712
C3ZZF6_BRAFL
Uncharacterized protein.
      
 0.699
C3YXK9_BRAFL
Trifunctional purine biosynthetic protein adenosine-3; In the C-terminal section; belongs to the GART family. In the central section; belongs to the AIR synthase family.
      
 0.690
C3ZLV8_BRAFL
Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
  
 0.552
C3XPI2_BRAFL
Methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.
 
    
 0.527
C3YAG0_BRAFL
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
      
0.526
C3Z2T0_BRAFL
Uncharacterized protein.
      
 0.519
C3Z5H6_BRAFL
Uncharacterized protein; Belongs to the BolA/IbaG family.
      
 0.509
PTCH3
Uncharacterized protein.
 
  
 
 0.468
C3XW60_BRAFL
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.453
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.