STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZVR8_BRAFLHORMA domain-containing protein. (224 aa)    
Predicted Functional Partners:
C3Y6K1_BRAFL
Uncharacterized protein.
   
 0.998
C3YI96_BRAFL
DNA polymerase.
    
 0.996
C3YI97_BRAFL
DNA_pol_B_exo1 domain-containing protein.
    
 0.986
C3Y9F3_BRAFL
Uncharacterized protein.
    
 0.984
C3ZD95_BRAFL
Uncharacterized protein.
    
 0.983
C3Y5K6_BRAFL
DNA polymerase.
    
 0.905
C3YFI7_BRAFL
AAA domain-containing protein; Belongs to the AAA ATPase family.
    
 
 0.905
C3Z3L2_BRAFL
UmuC domain-containing protein.
   
 0.891
C3YBI7_BRAFL
UmuC domain-containing protein.
   
 0.871
C3YEL6_BRAFL
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
    
 0.854
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.