STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZX83_BRAFLUncharacterized protein. (452 aa)    
Predicted Functional Partners:
C3ZPA4_BRAFL
Calcium load-activated calcium channel; Calcium-selective channel required to prevent calcium stores from overfilling.
    
 
 0.937
C3ZMT6_BRAFL
Uncharacterized protein.
    
 
 0.933
C3YBA6_BRAFL
Nicalin; Belongs to the nicastrin family.
    
 
 0.932
C3YLN9_BRAFL
Plug_translocon domain-containing protein.
   
 
 0.908
C3ZGZ4_BRAFL
Uncharacterized protein.
    
   0.850
C3ZWW4_BRAFL
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum.
    
   0.850
C3Y9H8_BRAFL
Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.
    
 
 0.841
C3ZTF1_BRAFL
Uncharacterized protein.
   
   0.832
C3YVK3_BRAFL
60S ribosomal protein L18a; Belongs to the eukaryotic ribosomal protein eL20 family.
   
   0.830
C3Y4R0_BRAFL
Uncharacterized protein; Belongs to the universal ribosomal protein uL5 family.
   
   0.826
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (30%) [HD]