STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3ZZX4_BRAFLAA_TRNA_LIGASE_II domain-containing protein. (423 aa)    
Predicted Functional Partners:
C3XZ88_BRAFL
Uncharacterized protein.
  
 0.989
C3ZM79_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.928
GATC_BRAFL
Glutamyl-tRNA(Gln) amidotransferase subunit C, mitochondrial; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in the mitochondria. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu-tRNA(Gln). Belongs to the GatC family.
     
  0.900
C3XZT1_BRAFL
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
 
      0.899
C3Y7Y4_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.835
C3Z4B7_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.835
C3YTK3_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 
 0.804
C3Z419_BRAFL
GIY-YIG domain-containing protein.
   
 0.737
C3Y430_BRAFL
Uncharacterized protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.729
C3YJV4_BRAFL
tRNA-synt_1g domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
 0.727
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.