STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4A0B4_BRAFLMelibiase_C domain-containing protein; Belongs to the glycosyl hydrolase 27 family. (294 aa)    
Predicted Functional Partners:
C3YQL4_BRAFL
Beta-galactosidase.
  
 
 0.470
C3YS95_BRAFL
Alpha-galactosidase.
  
     0.469
C3Z2G6_BRAFL
Beta-galactosidase.
  
 
 0.467
C3YW26_BRAFL
Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.453
C3XYY9_BRAFL
Uncharacterized protein.
   
 
 0.451
C3Y252_BRAFL
Uncharacterized protein.
   
 
 0.451
C3XRZ8_BRAFL
Alpha-(1,6)-fucosyltransferase; Catalyzes the addition of fucose in alpha 1-6 linkage to the first GlcNAc residue, next to the peptide chains in N-glycans. Belongs to the glycosyltransferase 23 family.
      
 0.438
C3Z8S2_BRAFL
Beta-glucuronidase; Plays an important role in the degradation of dermatan and keratan sulfates; Belongs to the glycosyl hydrolase 2 family.
      
 0.436
FUCO_BRAFL
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins; Belongs to the glycosyl hydrolase 29 family.
   
  
 0.433
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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