STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C4A0E4_BRAFLUncharacterized protein. (425 aa)    
Predicted Functional Partners:
C3XUM5_BRAFL
Uncharacterized protein.
  
 
 0.923
C3XSX2_BRAFL
4HBT domain-containing protein.
     
 0.912
C3Y8C1_BRAFL
ATP-dependent 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. ATP-dependent PFK group I subfamily. Eukaryotic two domain clade 'E' sub-subfamily.
    
  0.901
C3YM48_BRAFL
S5A_REDUCTASE domain-containing protein.
     
 0.900
C3YQL7_BRAFL
SCP2 domain-containing protein.
   
 
 0.505
C3ZVX5_BRAFL
Uncharacterized protein; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.505
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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