STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FUCO_BRAFLAlpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins; Belongs to the glycosyl hydrolase 29 family. (449 aa)    
Predicted Functional Partners:
C3YBV1_BRAFL
Uncharacterized protein.
      
 0.729
C3YQL4_BRAFL
Beta-galactosidase.
 
 
 0.543
C3Z2G6_BRAFL
Beta-galactosidase.
 
 
 0.543
C3YGC4_BRAFL
Uncharacterized protein.
      
 0.538
C3Y110_BRAFL
Uncharacterized protein.
      
 0.530
C3YDH0_BRAFL
Uncharacterized protein.
      
 0.528
C3Y4K4_BRAFL
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism. Adenylate kinase activity is critical for regulation of the phosphate utilization and the AMP de novo biosynthesis pathways.
      
 0.527
C3YQF4_BRAFL
Pyruvate carboxyltransferase domain-containing protein.
 
      0.510
C3YW26_BRAFL
Uncharacterized protein; Belongs to the glycosyl hydrolase 35 family.
  
 
 0.468
C3YQ45_BRAFL
Beta-hexosaminidase.
  
  
 0.461
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
Server load: low (26%) [HD]