STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3Y6T6_BRAFLUncharacterized protein. (500 aa)    
Predicted Functional Partners:
C3ZY33_BRAFL
WD_REPEATS_REGION domain-containing protein.
 
      0.856
C3ZHZ1_BRAFL
SUN domain-containing protein.
    
   0.809
C3ZQG0_BRAFL
Uncharacterized protein.
   
    0.567
C3ZFF5_BRAFL
Mothers against decapentaplegic homolog.
   
  
 0.538
C3YII9_BRAFL
Uncharacterized protein.
      
 0.503
Q8T600_BRAFL
Mesenchyme homeobox.
      
 0.448
C3YZC7_BRAFL
Uncharacterized protein.
      
 0.445
C4A0B6_BRAFL
Tyrosine-protein kinase receptor.
      
 0.426
C3Z5A3_BRAFL
Receptor protein serine/threonine kinase; Belongs to the protein kinase superfamily.
   
  
 0.419
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.