STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dll1Homeobox protein DLL-like protein, distalless. (320 aa)    
Predicted Functional Partners:
C3ZCQ2_BRAFL
Homeobox domain-containing protein.
   
 
 0.665
C3ZMX3_BRAFL
Homeobox domain-containing protein.
    
 
 0.603
C3ZLQ2_BRAFL
Homeobox domain-containing protein.
   
  
 0.598
C3XTT9_BRAFL
Iroquois 3.
   
 
 0.592
C3ZPS1_BRAFL
BHLH domain-containing protein.
   
  
 0.572
C3Y242_BRAFL
LIM class homeodomain transcription factor, islet subclass.
      
 0.502
C3YZK5_BRAFL
SAM domain-containing protein.
      
 0.489
C3Y315_BRAFL
LIM class homeodomain transcription factor, Lhx6/8 subclass.
   
  
 0.459
C3YFG8_BRAFL
Uncharacterized protein.
   
  
 0.445
C3YEY9_BRAFL
Iroquois family related homeobox.
   
 
 0.441
Your Current Organism:
Branchiostoma floridae
NCBI taxonomy Id: 7739
Other names: Amphioxus floridae, B. floridae, Florida lancelet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.