STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R5B2_PETMAImpact RWD domain protein. (300 aa)    
Predicted Functional Partners:
S4RHX6_PETMA
Cytidine monophosphate (UMP-CMP) kinase 2, mitochondrial.
    
  0.845
S4RDJ6_PETMA
Uncharacterized protein.
    
 0.830
S4RLN0_PETMA
Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.830
S4RNU7_PETMA
Glyoxylate reductase/hydroxypyruvate reductase a; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.829
S4RXN7_PETMA
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.829
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
  
 
  0.827
S4RYW4_PETMA
Deoxyuridine triphosphatase.
    
  0.825
S4RRJ6_PETMA
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family.
    
  0.824
S4RKK1_PETMA
Thioredoxin reductase 3.
  
 
  0.816
S4RIN7_PETMA
Ataxin 2.
    
 
 0.648
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.