STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RMC3_PETMAAlpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family. (95 aa)    
Predicted Functional Partners:
CA10
Carbonic anhydrase 10; Belongs to the alpha-carbonic anhydrase family.
 
      0.900
CA10-2
Carbonic anhydrase 10; Belongs to the alpha-carbonic anhydrase family.
 
      0.900
S4RAQ9_PETMA
Ribosomal_L18_c domain-containing protein.
    
 
 0.604
S4RPR3_PETMA
Ribosome biogenesis regulatory protein; Involved in ribosomal large subunit assembly. Belongs to the RRS1 family.
   
 
 0.568
S4RYY5_PETMA
Ribosomal protein L11.
    
 
 0.557
S4R4K3_PETMA
Uncharacterized protein.
   
  
 0.478
S4RND1_PETMA
WD repeat domain 43.
   
    0.461
S4R731_PETMA
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
  
 0.458
S4RRJ1_PETMA
WD repeat domain 36.
   
    0.455
S4RSV7_PETMA
Ribosomal RNA processing 12 homolog.
   
    0.452
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.