STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDP1-2Pyruvate dehyrogenase phosphatase catalytic subunit 1. (451 aa)    
Predicted Functional Partners:
S4RCK5_PETMA
Uncharacterized protein.
    
 0.733
PDPR
Pyruvate dehydrogenase phosphatase regulatory subunit.
   
 0.728
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
  
 0.722
CLPB
ClpB homolog, mitochondrial AAA ATPase chaperonin.
  
 
 0.696
S4RC94_PETMA
Dimethylglycine dehydrogenase.
   
 0.683
S4RWR1_PETMA
Mitogen-activated protein kinase kinase 7.
    
  0.658
S4RTK8_PETMA
Sarcosine dehydrogenase.
   
 0.644
S4RJA4_PETMA
Mitogen-activated protein kinase kinase 6; Belongs to the protein kinase superfamily.
    
 0.596
S4RUW3_PETMA
GTP_cyclohydroI domain-containing protein.
    
  0.589
S4RN22_PETMA
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
     
 0.586
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.