STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4RPL8_PETMAUncharacterized protein; Belongs to the PI3/PI4-kinase family. (1102 aa)    
Predicted Functional Partners:
S4RZ01_PETMA
Uncharacterized protein.
    
 0.995
S4RDW5_PETMA
Uncharacterized protein; Belongs to the PI3/PI4-kinase family.
   
0.991
S4RG41_PETMA
FHA domain-containing protein.
    
 0.989
S4RPZ6_PETMA
MRE11 homolog A, double strand break repair nuclease.
   
 0.982
S4RTC7_PETMA
Uncharacterized protein.
    
 0.982
S4RHC2_PETMA
RAD50 homolog, double strand break repair protein.
   
 0.971
S4RQW7_PETMA
BRCT domain-containing protein.
    
 0.940
S4RUC9_PETMA
TAN domain-containing protein.
 
     0.925
CHEK1
Checkpoint kinase 1.
    
 0.910
S4RKI1_PETMA
X-ray repair complementing defective repair in Chinese hamster cells 6.
    
 0.892
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.