STRINGSTRING
LPERR05G02400.1 protein (Leersia perrieri) - STRING interaction network
"LPERR05G02400.1" - annotation not available in Leersia perrieri
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LPERR05G02400.1annotation not available (427 aa)    
Predicted Functional Partners:
LPERR07G07100.2
annotation not available (471 aa)
           
  0.768
LPERR01G32930.1
annotation not available (471 aa)
           
  0.768
LPERR02G15830.1
annotation not available (432 aa)
           
  0.767
LPERR06G09540.1
annotation not available (469 aa)
           
  0.734
LPERR06G09520.1
annotation not available (480 aa)
           
  0.734
LPERR12G11990.3
annotation not available (314 aa)
     
   
  0.689
LPERR01G24910.2
annotation not available (278 aa)
     
   
  0.689
LPERR05G06370.1
annotation not available (692 aa)
           
  0.686
LPERR01G22260.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (718 aa)
       
 
  0.622
LPERR05G21300.1
annotation not available (339 aa)
       
 
  0.621
Your Current Organism:
Leersia perrieri
NCBI taxonomy Id: 77586
Other names: L. perrieri, Leersia perrieri, Leersia perrieri (A.Camus) Launert
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