STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2223TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: acr:Acry_0964 glycine oxidase ThiO. (401 aa)    
Predicted Functional Partners:
thiG
Thiazole biosynthesis family protein; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.
 
 0.998
Xaut_2224
TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: acr:Acry_0963 thiamine biosynthesis protein ThiS.
 
  
 0.955
Xaut_0867
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: gbe:GbCGDNIH1_0080 sarcosine oxidase alpha subunit.
  
 
 0.879
Xaut_4702
TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); KEGG: bbt:BBta_1947 sarcosine oxidase, alpha subunit.
  
 
 0.879
Xaut_2226
PFAM: thiamine monophosphate synthase; KEGG: stp:Strop_3885 thiamine monophosphate synthase.
 
  
 0.800
Xaut_0868
TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: rde:RD1_1702 sarcosine oxidase, delta subunit.
 
 
 0.505
Xaut_2222
PFAM: Glutathione S-transferase domain; KEGG: bja:bll0773 hypothetical glutathione S-transferase like protein.
     
 0.504
Xaut_2403
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.458
Xaut_0866
PFAM: Sarcosine oxidase gamma subunit; KEGG: acr:Acry_0995 sarcosine oxidase, gamma subunit.
 
 
 0.441
Xaut_2227
PFAM: monooxygenase FAD-binding; KEGG: rha:RHA1_ro04915 monooxygenase.
  
  
 0.428
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.