STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2310TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: xcb:XC_0142 trehalose synthase. (1098 aa)    
Predicted Functional Partners:
Xaut_1722
HAD-superfamily hydrolase, subfamily IIB; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
 0.981
Xaut_0922
PFAM: amino acid permease-associated region; KEGG: mlo:mll7301 amino acid transporter.
  
 0.804
Xaut_3183
PFAM: amino acid permease-associated region; KEGG: mfa:Mfla_0446 amino acid permease-associated region.
  
 0.804
Xaut_4032
PFAM: amino acid permease-associated region; KEGG: atc:AGR_C_3885 hypothetical protein.
  
 0.804
Xaut_4472
PFAM: amino acid permease-associated region; KEGG: cbu:CBU_0354 amino acid permease family protein.
  
 0.804
Xaut_1721
Alpha,alpha-trehalose-phosphate synthase (UDP-forming); Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
 
  
 0.753
Xaut_2711
PFAM: Amylo-alpha-16-glucosidase; KEGG: sme:SMb20116 hypothetical protein.
 
 
 
 0.691
Xaut_0503
PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bja:blr3917 ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 0.671
Xaut_0501
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sme:SMb20659 putative sugar uptake ABC transporter permease protein.
 
  
 0.656
Xaut_0477
PFAM: glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; ferredoxin-dependent glutamate synthase; glutamate synthase; KEGG: bov:BOV_A0049 glutamate synthase, large subunit.
  
  
 0.556
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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