STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_2618TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bra:BRADO2772 putative nitrate ABC transporter (permease protein) (NtrB-like protein). (279 aa)    
Predicted Functional Partners:
Xaut_2617
KEGG: bja:bll5734 ABC transporter nitrate-binding protein.
 
 0.996
Xaut_2619
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpa:RPA2114 putative nitrate transport system ATP-binding protein.
 
 0.996
Xaut_2502
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1758 nitrate transport ATP-binding subunits C and D.
 
 0.983
Xaut_2504
KEGG: atc:AGR_L_1886 nitrate-binding protein nrtA precursor, periplasmic.
 
 0.983
Xaut_1084
KEGG: mag:amb0537 ABC-type nitrate/sulfonate/bicarbonate transport systems.
 
 0.967
Xaut_1082
TIGRFAM: nitrate ABC transporter, ATPase subunits C and D; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sde:Sde_2266 regulatory proteins, AsnC/Lrp.
 
 0.948
Xaut_2497
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: rpb:RPB_1752 molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.927
Xaut_1078
PFAM: molybdopterin oxidoreductase; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase Fe4S4 region; BFD domain protein [2Fe-2S]-binding domain protein; KEGG: sme:SMb20986 putative nitrate reductase, large subunit protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
 
  
 0.923
Xaut_1083
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: rde:RD1_4170 nitrate ABC transporter, permease component.
  
  
 
0.915
Xaut_2503
TIGRFAM: nitrate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mlo:mlr2860 nitrate transporter component, nrtB.
  
  
 
0.910
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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