STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpKGlycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. (497 aa)    
Predicted Functional Partners:
Xaut_2808
PFAM: FAD dependent oxidoreductase; KEGG: acr:Acry_2385 FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.999
Xaut_0779
KEGG: sal:Sala_0052 hypothetical protein.
   
 0.963
Xaut_2320
TIGRFAM: MIP family channel protein; PFAM: major intrinsic protein; KEGG: hne:HNE_0461 aquaporin Z; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.921
plsY
Protein of unknown function DUF205; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.
    
 0.921
Xaut_0011
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: vei:Veis_1883 iron-containing alcohol dehydrogenase.
     
 0.915
Xaut_1714
PFAM: iron-containing alcohol dehydrogenase; 3-dehydroquinate synthase; KEGG: vei:Veis_0902 iron-containing alcohol dehydrogenase.
     
 0.915
Xaut_1916
TIGRFAM: CbxX/CfqX monofunctional; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: bbt:BBta_0453 putative CbbX-like protein, containing AAA-ATPase domain.
  
  0.750
Xaut_3792
PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: rpb:RPB_2407 glycerophosphoryl diester phosphodiesterase.
  
  
 0.713
Xaut_2536
Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
 
 
  
 0.697
Xaut_4425
TIGRFAM: citrate synthase I; PFAM: Citrate synthase; KEGG: bov:BOV_1106 citrate (Si)-synthase; Belongs to the citrate synthase family.
  
  
 0.676
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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