STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_3711Hypothetical protein. (169 aa)    
Predicted Functional Partners:
Xaut_3712
KEGG: rru:Rru_A2585 hypothetical protein.
       0.773
Xaut_3713
KEGG: mes:Meso_1221 hypothetical protein.
       0.773
Xaut_3714
KEGG: mes:Meso_1226 hypothetical protein.
       0.773
Xaut_3710
Hypothetical protein.
       0.601
Xaut_3715
KEGG: mlo:mlr8018 hypothetical protein.
       0.598
Xaut_3709
TIGRFAM: phage major capsid protein, HK97 family; PFAM: major capsid protein HK97; KEGG: mmr:Mmar10_0922 phage major capsid protein, HK97 family.
       0.454
Xaut_3708
TIGRFAM: phage prohead protease, HK97 family; PFAM: peptidase U35 phage prohead HK97; KEGG: bov:BOV_0589 caudovirus prohead protease.
       0.404
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.