STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xaut_4221PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: psp:PSPPH_2266 alkyl hydroperoxide reductase, F subunit. (529 aa)    
Predicted Functional Partners:
Xaut_4220
Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.
 
 
 0.998
Xaut_2363
Peroxidase; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: fjo:Fjoh_5017 peroxidase.
  
  
 0.803
Xaut_4039
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: bpa:BPP4146 putative oxidoreductase.
 
  
 0.687
Xaut_4222
Transcriptional regulator, LysR family; PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: xcb:XC_3398 oxidative stress transcriptional regulator.
 
   
 0.683
Xaut_3301
TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: rpd:RPD_0201 thioredoxin; Belongs to the thioredoxin family.
 
  
 0.649
Xaut_4157
PFAM: Ferritin Dps family protein; KEGG: nwi:Nwi_2447 ferritin and Dps; Belongs to the Dps family.
 
  
 0.599
Xaut_3319
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
  
  
 0.568
Xaut_2321
PFAM: Catalase domain protein; KEGG: bov:BOV_A0322 catalase.
  
  
 0.548
Xaut_2753
TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rpb:RPB_1512 thioredoxin reductase.
 
  
0.414
Your Current Organism:
Xanthobacter autotrophicus
NCBI taxonomy Id: 78245
Other names: X. autotrophicus Py2, Xanthobacter autotrophicus Py2, Xanthobacter autotrophicus str. Py2, Xanthobacter autotrophicus strain Py2, Xanthobacter sp. Py2
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