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STRINGSTRING
SEC22C protein (Latimeria chalumnae) - STRING interaction network
"SEC22C" - SEC22 vesicle trafficking protein homolog C (S. cerevisiae) in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC22CSEC22 vesicle trafficking protein homolog C (S. cerevisiae) (66 aa)    
Predicted Functional Partners:
GOSR2
Golgi SNAP receptor complex member 2; Involved in transport of proteins from the cis/medial- Golgi to the trans-Golgi network (213 aa)
     
 
  0.866
STX5
Syntaxin 5A, like; Belongs to the syntaxin family (350 aa)
     
 
  0.853
SCFD1
Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family (632 aa)
     
 
  0.847
BET1L
Bet1 golgi vesicular membrane trafficking protein like; Blocked early in transport 1 homolog (S. cerevisiae)-like (112 aa)
     
 
  0.837
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide- sensitive factor) attachment protein receptor (250 aa)
     
 
  0.814
STX18
Syntaxin 18 (329 aa)
     
 
  0.794
USO1
USO1 vesicle transport factor (980 aa)
     
 
  0.774
USE1
Unconventional SNARE in the ER 1 homolog (S. cerevisiae) (268 aa)
     
 
  0.772
RINT1
Uncharacterized protein; RAD50 interactor 1 (442 aa)
     
 
  0.763
YKT6
YKT6 v-SNARE homolog (S. cerevisiae); Belongs to the synaptobrevin family (199 aa)
     
 
  0.758
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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