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UBE2D2 protein (Latimeria chalumnae) - STRING interaction network
"UBE2D2" - Ubiquitin-conjugating enzyme E2D 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2D2Ubiquitin-conjugating enzyme E2D 2 (146 aa)    
Predicted Functional Partners:
UBA52
Uncharacterized protein (128 aa)
     
  0.990
KXD1
Ubiquitin A-52 residue ribosomal protein fusion product 1 (231 aa)
     
  0.980
ANAPC11
Anaphase promoting complex subunit 11 (84 aa)
     
  0.939
RNF44
Ring finger protein 44 (446 aa)
     
  0.935
RNF38
Ring finger protein 38 (485 aa)
     
  0.935
RPS27A
Ribosomal protein S27a (156 aa)
     
  0.934
UBA6
Ubiquitin-like modifier activating enzyme 6 (1027 aa)
     
  0.921
UBA7
Ubiquitin-like modifier activating enzyme 7 (915 aa)
     
  0.921
UBA1
Ubiquitin-like modifier activating enzyme 1 (1059 aa)
     
  0.921
FANCM
Fanconi anemia, complementation group M (2075 aa)
     
  0.907
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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