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STRINGSTRING
UBE2D2 protein (Latimeria chalumnae) - STRING interaction network
"UBE2D2" - Ubiquitin-conjugating enzyme E2D 2 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBE2D2Ubiquitin-conjugating enzyme E2D 2; Belongs to the ubiquitin-conjugating enzyme family (146 aa)    
Predicted Functional Partners:
RNF165
Ring finger protein 165 (351 aa)
     
 
  0.967
RNF38
Ring finger protein 38 (485 aa)
       
 
  0.950
CNOT4
CCR4-NOT transcription complex, subunit 4 (764 aa)
     
 
  0.926
ANAPC11
Anaphase promoting complex subunit 11 (84 aa)
     
 
  0.904
RPS27A
Ribosomal protein S27a (156 aa)
     
 
  0.897
NEDD4L
E3 ubiquitin-protein ligase; Neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase (876 aa)
     
 
  0.896
BMI1
Bmi1 polycomb ring finger oncogene 1a; B lymphoma Mo-MLV insertion region 1a (326 aa)
     
 
  0.884
BIRC2
Baculoviral IAP repeat-containing 2 (616 aa)
     
 
  0.863
ZAP70
Zeta-chain (TCR) associated protein kinase 70kDa (609 aa)
       
      0.857
ENSLACG00000004350
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (103 aa)
     
 
  0.856
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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