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INO80E protein (Latimeria chalumnae) - STRING interaction network
"INO80E" - INO80 complex subunit E in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
INO80EINO80 complex subunit E (159 aa)    
Predicted Functional Partners:
MOCS1
Molybdenum cofactor synthesis 1 (563 aa)
       
      0.909
NFRKB
Nuclear factor related to kappaB binding protein (1198 aa)
       
  0.631
INO80
INO80 homolog (S. cerevisiae) (1542 aa)
     
  0.631
UCHL5
Ubiquitin carboxyl-terminal hydrolase L5 (329 aa)
     
    0.625
ACTR5
ARP5 actin-related protein 5 homolog (yeast) (594 aa)
     
    0.625
EP400
E1A binding protein p400 (3047 aa)
       
  0.509
SRCAP
Snf2-related CREBBP activator protein (2803 aa)
       
  0.509
BAP1
BRCA1 associated protein-1 (ubiquitin carboxy-terminal hydrolase) (721 aa)
     
    0.503
CCNDBP1
Cyclin D-type binding-protein 1 (355 aa)
       
      0.443
PRRT2
Proline-rich transmembrane protein 2 (97 aa)
     
   
  0.425
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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