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SLC17A6 protein (Latimeria chalumnae) - STRING interaction network
"SLC17A6" - Solute carrier family 17 (vesicular glutamate transporter), member 6 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC17A6Solute carrier family 17 (vesicular glutamate transporter), member 6 (391 aa)    
Predicted Functional Partners:
GAD1
Glutamate decarboxylase 1 (brain, 67kDa) (590 aa)
     
   
  0.699
DLG4
Discs, large homolog 4 (Drosophila); Belongs to the MAGUK family (828 aa)
     
 
  0.679
SLC32A1
Solute carrier family 32 (GABA vesicular transporter), member 1 (520 aa)
     
   
  0.627
PVALB
Parvalbumin alpha; In muscle, parvalbumin is thought to be involved in relaxation after contraction. It binds two calcium ions (By similarity) (112 aa)
     
 
  0.587
GPHN
Gephyrin (777 aa)
           
  0.572
SLC18A3
Solute carrier family 18 (vesicular acetylcholine), member 3a (530 aa)
     
   
  0.559
SLC6A5
Transporter; Solute carrier family 6 (neurotransmitter transporter, glycine), member 5; Belongs to the sodium-neurotransmitter symporter (SNF) (TC 2.A.22) family (796 aa)
     
   
  0.556
GRIA1
Glutamate receptor, ionotropic, AMPA 1 (835 aa)
     
   
  0.506
SLC22A3
Uncharacterized protein; Solute carrier family 22 (organic cation transporter), member 3 (365 aa)
     
   
  0.482
CSTF3
Cleavage stimulation factor, 3’ pre-RNA, subunit 3 (715 aa)
     
   
  0.482
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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