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CHRNA1 protein (Latimeria chalumnae) - STRING interaction network
"CHRNA1" - Cholinergic receptor, nicotinic, alpha 1 in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHRNA1Cholinergic receptor, nicotinic, alpha 1 (muscle) (338 aa)    
Predicted Functional Partners:
CHRND
Cholinergic receptor, nicotinic, delta (muscle) (525 aa)
     
 
0.803
BRCA2
Uncharacterized protein; Breast cancer 2, early onset (1245 aa)
           
  0.790
RAG2
Recombination activating gene 2 (522 aa)
     
   
  0.748
ADRB2
Adrenoceptor beta 2, surface (432 aa)
       
 
  0.721
RAPSN
Receptor-associated protein of the synapse (420 aa)
     
 
  0.704
ATP1B4
Sodium/potassium-transporting ATPase subunit beta; This is the non-catalytic component of the active enzyme, which catalyzes the hydrolysis of ATP coupled with the exchange of Na(+) and K(+) ions across the plasma membrane (324 aa)
     
   
  0.693
PNOC
Prepronociceptin b (244 aa)
           
  0.659
COLQ
Collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase (452 aa)
       
 
  0.658
ENSLACG00000001869
Docking protein 7 (565 aa)
     
   
  0.654
LPP
LIM domain containing preferred translocation partner in lipoma (628 aa)
     
   
  0.647
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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