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RPH3A protein (Latimeria chalumnae) - STRING interaction network
"RPH3A" - Rabphilin 3A in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPH3ARabphilin 3A (574 aa)    
Predicted Functional Partners:
SNAP25
Synaptosomal-associated protein, 25kDa; Belongs to the SNAP-25 family (206 aa)
     
 
  0.969
RAB3C
RAB3C, member RAS oncogene family (225 aa)
     
 
  0.922
ENSLACG00000000337
annotation not available (158 aa)
     
 
  0.922
RAB27A
RAB27A, member RAS oncogene family (221 aa)
     
 
  0.878
RAB27B
RAB27B, member RAS oncogene family (220 aa)
     
 
  0.809
RAB3D
RAB3D, member RAS oncogene family (223 aa)
     
 
  0.804
SNAP23
Synaptosomal-associated protein, 23kDa; Belongs to the SNAP-25 family (206 aa)
     
 
  0.784
TOM1
Target of myb1 (chicken); Belongs to the TOM1 family (494 aa)
           
  0.715
SCAMP2
Secretory carrier membrane protein 2 (259 aa)
           
  0.637
UNC13D
Unc-13 homolog D (C. elegans) (815 aa)
     
   
  0.634
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, Latimeria chalumnae, coelacanth
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