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RPH3A protein (Latimeria chalumnae) - STRING interaction network
"RPH3A" - Rabphilin 3A homolog in Latimeria chalumnae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPH3ARabphilin 3A homolog (mouse) (574 aa)    
Predicted Functional Partners:
RAB27A
RAB27A, member RAS oncogene family (221 aa)
       
 
  0.917
RAB27B
RAB27B, member RAS oncogene family (220 aa)
       
 
  0.896
RAB3C
RAB3C, member RAS oncogene family (225 aa)
     
 
  0.564
NPBWR1
Neuropeptides B/W receptor 1 (332 aa)
     
   
  0.527
RAB3D
RAB3D, member RAS oncogene family (223 aa)
     
 
  0.437
RAB3A
RAB3A, member RAS oncogene family (158 aa)
     
 
  0.437
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: Actinistia, Choanichthyes, Coelacanthidae, Coelacanthiformes, Coelacanthimorpha, Crossopterygii, L. chalumnae, Latimeria, Latimeria chalumnae, Latimeriidae, coelacanth, coelacanths, lobe-finned fishes
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